Index

A B C D F G H I L M O S T U V W
All Classes and Interfaces|All Packages|Constant Field Values|Serialized Form

A

AbsorptionOptionsDialog - Class in ui.dialog

Dialog for configuring absorption plot options.

AbsorptionOptionsDialog(JFrame, List<String>) - Constructor for class ui.dialog.AbsorptionOptionsDialog

Constructs the absorption options dialog.

addMeasurement(double[]) - Method in class core.MeasurementSet

Adds a single measurement (spectrum) to the set.

app - package app

B

BAR - Enum constant in enum class core.Visualizer.PlotType

Bar chart (categorical).

C

centerPanel - Variable in class ui.MainWindow

Center panel containing visualizations.

clear() - Method in class core.MeasurementSet

Clears all measurements, parameters, and name.

close() - Method in class core.Spectrometer

Close serial port connection.

configure(int, int, int, String, int, int) - Method in class core.Spectrometer

Configure measurement parameters.

ConfigureDialog - Class in ui.dialog

Dialog for configuring spectrometer measurement parameters.

ConfigureDialog(JFrame, Map<String, Object>) - Constructor for class ui.dialog.ConfigureDialog

Constructs the configuration dialog.

core - package core

createAbsorptionChart(MeasurementSet, MeasurementSet) - Method in class core.Visualizer

Create absorption chart comparing reference and sample.

createBarChart() - Method in class core.Visualizer

Create bar chart for current measurement set.

CreateCenterPanel - Class in ui.panel

Center panel of the main window, responsible for displaying visualizations such as spectrum plots and absorption charts.

CreateCenterPanel(MainWindow) - Constructor for class ui.panel.CreateCenterPanel

Constructs the center panel with a placeholder.

createCurveChart() - Method in class core.Visualizer

Create curve chart for current measurement set.

CreateFileMenu - Class in ui.menu

File menu providing load, save, and exit functionality.

CreateFileMenu(CreateMenuBar) - Constructor for class ui.menu.CreateFileMenu

Constructs the File menu with its menu items.

CreateLeftPanel - Class in ui.panel

Left panel of the main window containing the list of measurements.

CreateLeftPanel(MainWindow) - Constructor for class ui.panel.CreateLeftPanel

Constructs the left panel with the measurement list.

CreateMeasurementMenu - Class in ui.menu

Measurement menu providing spectrometer connection, configuration, and data acquisition functionality.

CreateMeasurementMenu(CreateMenuBar) - Constructor for class ui.menu.CreateMeasurementMenu

Constructs the Measurement menu with its menu items.

CreateMenuBar - Class in ui.menu

Main menu bar for the application.

CreateMenuBar(MainWindow) - Constructor for class ui.menu.CreateMenuBar

Constructs the menu bar with all sub-menus.

CreateViewMenu - Class in ui.menu

View menu providing spectrum and absorption plot visualization.

CreateViewMenu(CreateMenuBar) - Constructor for class ui.menu.CreateViewMenu

Constructs the View menu with its menu items.

CURVE - Enum constant in enum class core.Visualizer.PlotType

Curve/line chart.

D

DialogUtils - Class in ui.dialog

Utility class for displaying common dialog boxes.

DialogUtils() - Constructor for class ui.dialog.DialogUtils

F

FREQUENCY - Enum constant in enum class core.Visualizer.AxisType

Frequency axis in Terahertz (THz).

G

getAverageAndStd() - Method in class core.MeasurementSet

Calculate mean and standard deviation across all measurements.

getMeasurements() - Method in class core.MeasurementSet

Returns an unmodifiable list of all measurements.

getMeasurementSet() - Method in class core.Spectrometer

Gets the current measurement set.

getName() - Method in class core.MeasurementSet

Gets the name of this measurement set.

getParameters() - Method in class core.MeasurementSet

Gets a copy of the measurement parameters.

getParameters() - Method in class ui.dialog.ConfigureDialog

Returns the parameter values entered by the user.

getPlotType() - Method in class ui.dialog.SpectrumOptionsDialog

Returns the selected plot type.

getPortName() - Method in class core.Spectrometer

Gets the serial port name.

getReferenceName() - Method in class ui.dialog.AbsorptionOptionsDialog

Returns the name of the selected reference measurement.

getSampleName() - Method in class ui.dialog.AbsorptionOptionsDialog

Returns the name of the selected sample measurement.

getStatisticsString() - Method in class core.MeasurementSet

Get formatted statistics as string.

H

handleError(JFrame, String, Exception) - Static method in class ui.dialog.DialogUtils

Handles an exception by printing the stack trace and showing an error dialog.

I

isConfirmed() - Method in class ui.dialog.AbsorptionOptionsDialog

Returns whether the user confirmed the dialog (clicked OK).

isConfirmed() - Method in class ui.dialog.ConfigureDialog

Returns whether the user confirmed the dialog (clicked OK).

isConfirmed() - Method in class ui.dialog.SpectrumOptionsDialog

Returns whether the user confirmed the dialog (clicked OK).

isEmpty() - Method in class core.MeasurementSet

Checks if the measurement set is empty.

isNormalize() - Method in class ui.dialog.SpectrumOptionsDialog

Returns whether normalization should be applied.

isShowErrorBars() - Method in class ui.dialog.SpectrumOptionsDialog

Returns whether error bars should be shown.

isUseWavelength() - Method in class ui.dialog.AbsorptionOptionsDialog

Returns whether the wavelength axis should be used.

isUseWavelength() - Method in class ui.dialog.SpectrumOptionsDialog

Returns whether the wavelength axis should be used.

L

LEFT_PANEL_WIDTH - Static variable in class ui.MainWindow

Width of the left panel (measurement list) in pixels.

leftPanel - Variable in class ui.MainWindow

Left panel containing the measurement list.

loadFromFile(String) - Static method in class core.MeasurementSet

Load measurement set from a JSON file.

M

main(String[]) - Static method in class app.Main

The main method that serves as the entry point for the application.

Main - Class in app

Main application entry point.

Main() - Constructor for class app.Main

mainWindow - Variable in class ui.menu.CreateMenuBar

Reference to the main window.

mainWindow - Variable in class ui.panel.CreateCenterPanel

Reference to the main window for accessing shared data.

mainWindow - Variable in class ui.panel.CreateLeftPanel

Reference to the main window for accessing shared data.

MainWindow - Class in ui

Main application window for the Spectrometer Control Software.

MainWindow() - Constructor for class ui.MainWindow

Constructs the main window and initializes all UI components.

mean - Variable in class core.MeasurementSet.StatisticsResult

Mean values for each channel.

measure(String) - Method in class core.Spectrometer

Perform measurement with current configuration.

measurementList - Variable in class ui.MainWindow

JList component displaying measurement names.

measurementListModel - Variable in class ui.MainWindow

List model for the measurement list.

MeasurementSet - Class in core

Container for measurement data with metadata.

MeasurementSet() - Constructor for class core.MeasurementSet

Constructs an empty MeasurementSet.

MeasurementSet.StatisticsResult - Class in core

Container for statistical results (mean and standard deviation).

measurementSets - Variable in class ui.MainWindow

Map of measurement names to their corresponding MeasurementSet objects.

menuBar - Variable in class ui.MainWindow

Application menu bar.

O

onDisconnected() - Method in interface core.Spectrometer.ConnectionListener

Called when the serial port is disconnected.

S

saveToFile(String) - Method in class core.MeasurementSet

Save measurement set to a JSON file.

setAxisType(Visualizer.AxisType) - Method in class core.Visualizer

Sets the axis type.

setName(String) - Method in class core.MeasurementSet

Sets the name of this measurement set.

setNormalize(boolean) - Method in class core.Visualizer

Sets whether to normalize data to maximum value.

setParameters(Map<String, Object>) - Method in class core.MeasurementSet

Sets the measurement parameters.

setPlotType(Visualizer.PlotType) - Method in class core.Visualizer

Sets the plot type.

setPlotType(String) - Method in class core.Visualizer

Sets the plot type from a string.

setShowErrorBars(boolean) - Method in class core.Visualizer

Sets whether to show error bars.

showErrorDialog(JFrame, String, String) - Static method in class ui.dialog.DialogUtils

Displays an error dialog with the specified title and message.

showInfoDialog(JFrame, String, String) - Static method in class ui.dialog.DialogUtils

Displays an information dialog with the specified title and message.

size() - Method in class core.MeasurementSet

Returns the number of measurements stored.

spectrometer - Variable in class ui.MainWindow

Spectrometer hardware controller instance.

Spectrometer - Class in core

Main controller class for spectrometer hardware communication.

Spectrometer(Spectrometer.ConnectionListener) - Constructor for class core.Spectrometer

Constructor - establishes connection with Arduino/spectrometer.

Spectrometer.ConnectionListener - Interface in core

Listener interface for connection events.

SpectrumOptionsDialog - Class in ui.dialog

Dialog for configuring spectrum plot options.

SpectrumOptionsDialog(JFrame) - Constructor for class ui.dialog.SpectrumOptionsDialog

Constructs the spectrum options dialog.

StatisticsResult(double[], double[]) - Constructor for class core.MeasurementSet.StatisticsResult

Constructs a StatisticsResult.

std - Variable in class core.MeasurementSet.StatisticsResult

Standard deviation values for each channel.

T

toString() - Method in class core.MeasurementSet

Returns a formatted string representation of the measurement set.

U

ui - package ui

ui.dialog - package ui.dialog

ui.menu - package ui.menu

ui.panel - package ui.panel

useWavelengthAxis(boolean) - Method in class core.Visualizer

Convenience method to set wavelength/frequency axis.

V

valueOf(String) - Static method in enum class core.Visualizer.AxisType

Returns the enum constant of this class with the specified name.

valueOf(String) - Static method in enum class core.Visualizer.PlotType

Returns the enum constant of this class with the specified name.

values() - Static method in enum class core.Visualizer.AxisType

Returns an array containing the constants of this enum class, in the order they are declared.

values() - Static method in enum class core.Visualizer.PlotType

Returns an array containing the constants of this enum class, in the order they are declared.

Visualizer - Class in core

Handles visualization of spectrometer data.

Visualizer(MeasurementSet) - Constructor for class core.Visualizer

Constructs a Visualizer for the given measurement set.

Visualizer.AxisType - Enum Class in core

Enumeration of axis types for the x-axis.

Visualizer.PlotType - Enum Class in core

Enumeration of plot types.

W

WAVELENGTH - Enum constant in enum class core.Visualizer.AxisType

Wavelength axis in nanometers (nm).

A B C D F G H I L M O S T U V W
All Classes and Interfaces|All Packages|Constant Field Values|Serialized Form